gene disease0 BRIP1 Breast Neoplasms1 PTEN Breast Neoplasms2 CHEK2 Breast Neoplasms...
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## Prepare the documentsdocuments = generate_documents(content=abstract)## Set the LLMllm = GroqLLM(documents=documents, api_key=os.getenv("GROQ_API_KEY"))## Query your documentquery = "Is BRCA1 associated with breast cancer?"print(llm.query(query=query))
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The provided text suggests that BRCA1 is associated with breast cancer, as it is listed among the high-penetrance genes identified in family linkage studies as responsible for inherited syndromes of breast cancer.
** RESULTS **- High-penetrance genes - BRCA1, BRCA2, PTEN, TP53 - responsible for inherited syndromes- Moderate-penetrance genes - CHEK2, ATM, BRIP1, PALB2, RAD51C - associated with moderate BC risk- Low-penetrance alleles - common alleles - associated with slightly increased or decreased risk of BC- Current clinical practice - high-penetrance genes - widely used- Future prospect - all familial breast cancer genes - to be included in genetic test- Research need - clinical management - of moderate and low-risk variants